Mapped reads for uncultivated Arsukibacterium bacterium UBA9376 genom... - SRA

SRX3576253: Mapped reads for uncultivated Arsukibacterium bacterium UBA9376 genome recovered from ERX556310
1 ILLUMINA (Illumina HiSeq 2000) run: 198,158 spots, 36.8M bases, 21.7Mb downloads

Design: Reads from ERX556310 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA9376 genome.

Submitted by: University of Queensland

Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.

PRJNA417962 • SRP130174 • All experiments • All runs

show Abstracthide Abstract

Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.

Sample: Uncultivated Arsukibacterium bacterium UBA9376 genome recovered from ERX556310

SAMN08018289 • SRS2846134 • All experiments • All runs

Organism: Candidatus Azambacteria bacterium

Library:

Name: UBA9376_library

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: METAGENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 198,158 spots, 36.8M bases, 21.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR6486154	198,158	36.8M	21.7Mb	2018-02-23

ID:: 4961755

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Recent activity